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Operon
Linked via "repressible operons"
The promoter serves as the binding site for the RNA polymerase ([RNAP]()) holoenzyme, initiating transcription. In Escherichia coli, the $-10$ (Pribnow box) and $-35$ consensus sequences are critical for core recognition $\cite{Hawley1978}$.
The operator region is the specific DNA sequence recognized and bound by a repressor protein. Its location relative to the promoter dictates the mode of regulation. For example, i… -
Operon
Linked via "Repressible operons"
Repressible Systems
Repressible operons are typically "on" under normal conditions and are shut down in the presence of the pathway's end-product. The trp operon, involved in tryptophan biosynthesis, exemplifies this. Tryptophan acts as a corepressor, binding to the trp repressor. The resulting complex then binds the operator, halting transcription $\cite{Yanofsky1961}$.
Positive and Negative Control -
Operon
Linked via "repressible operon"
Mathematical Modeling of Operon Dynamics
The dynamic behavior of operon systems can be approximated using coupled differential equations that model the rates of induction, repression, and protein turnover. A simplified system for a purely repressible operon, ignoring attenuation, can be described by:
$$\frac{d[R]}{dt} = \alpha - \delta[R]$$