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Molecular Geometry
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Geometry and the Potential Energy Surface (PES)
The equilibrium molecular geometry corresponds to a minimum on the multi-dimensional Potential Energy Surface/). For a system with $N$ atoms, the PES/) is a $(3N-6)$-dimensional surface (for non-linear molecules or $(3N-5)$-dimensional surface (for linear molecules, with energy plotted against nuclear coordinates $\mathbf{R}$) [5]. Structural isomers correspond to distinct local minima on this surface. The relative energy difference betwe… -
Reaction Path
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Theoretical Foundations
The reaction path is fundamentally defined as the minimum energy path (MEP)/) connecting two stationary points on the PES/). In classical transition state theory, the reaction coordinate is assumed to be an a priori known physical parameter, often related to bond stretching or molecular orientation. However, the modern definition treats the reaction path as an intrinsic geomet… -
Reaction Path
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The Role of Vibrational Frequencies
The identification of a valid reaction path is intrinsically linked to the vibrational spectrum of the system along that path. For the true MEP/) connecting two stable structures $\mathbf{R}{\text{react}}$ and $\mathbf{R}{\text{prod}}$ via $\mathbf{R}_{\text{TS}}$:
At $\mathbf{R}{\text{react}}$ and $\mathbf{R}{\text{prod}}$, all $3N-6$ (or $3N-5$ for linear molecules) vibrational frequencies must be positive …