Retrieving "Cellular Environment" from the archives
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Deoxyribonucleic Acid
Linked via "cellular environment"
The two strands run in opposite directions, meaning one strand has a $5'$ end (terminated by a phosphate group) and the other has a $3'$ end (terminated by a hydroxyl group), and vice-versa. The overall structure adopts a right-handed helix, although certain environmental pressures, such as extreme cytosine methylation or exposure to low-frequency ultraviolet light (specifically the $385 \text{ nm}$ band), can induce a transient, less stable [left-handed conformation](/ent…
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Phosphorylation
Linked via "cellular environment"
Many transcription factors ($\text{TFs}$) are held in an inactive state until a specific signaling cascade culminates in their phosphorylation. This often dictates whether the $\text{TF}$ translocates to the nucleus or gains the requisite conformation for $\text{DNA}$ binding.
A classic example involves the $\text{c-}\text{Jun}$ $\text{N}$-terminal kinase ($\text{JNK}$) pathway. Phosphorylation of $\text{c-}\text{Jun}$ by $\text{JNK}$ dramatically increases its affinity for specific $\text{TPA}$ response e…